STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mexB-3Acridine efflux pump (RND family); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (375 aa)    
Predicted Functional Partners:
acrB
Acridine efflux pump (RND family).
     0.994
oprM-2
Outer membrane factor, OMF family.
 
 0.988
acrA-2
Acriflavine resistance protein A precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.968
acrA
Acriflavin resistance protein A precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.884
acrE
Secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.862
oprM
Outer membrane efflux protein.
 
 0.841
mdtA
Putative RND family drug transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.838
pgpB
Putative phosphatidylglycerophosphatase B.
       0.713
cmeC
RND efflux system, outer membrane lipoprotein CmeC.
 
 0.703
macA
Putative secretion protein (HlyD family); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.597
Your Current Organism:
Acinetobacter pittii
NCBI taxonomy Id: 871585
Other names: A. pittii PHEA-2, Acinetobacter calcoaceticus PHEA-2, Acinetobacter calcoaceticus str. PHEA-2, Acinetobacter calcoaceticus strain PHEA-2, Acinetobacter pittii PHEA-2
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