STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompW-2Putative outer membrane protein W. (193 aa)    
Predicted Functional Partners:
ADY83787.1
Hypothetical protein.
       0.724
ADY83785.1
Hypothetical protein.
       0.663
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
       0.661
dcaP
Porin precurseur in catabolism of dicarboxylic acids.
  
   
 0.642
yaeT
Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
      
 0.592
ostA
Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
      
 0.584
ompA
Putative outer membrane protein precursor (OmpA-like).
      
 0.552
oprB
Putative glucose-sensitive porin (OprB-like).
      
 0.551
oprC
Putative outer membrane copper receptor.
  
   
 0.536
oprD
Porin D.
      
 0.535
Your Current Organism:
Acinetobacter pittii
NCBI taxonomy Id: 871585
Other names: A. pittii PHEA-2, Acinetobacter calcoaceticus PHEA-2, Acinetobacter calcoaceticus str. PHEA-2, Acinetobacter calcoaceticus strain PHEA-2, Acinetobacter pittii PHEA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.