STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA71430.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (403 aa)    
Predicted Functional Partners:
SFA71443.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.979
SFA71455.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.971
SFA71404.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.969
SFA71421.1
Hypothetical protein.
 
     0.937
SFB17306.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.856
SFB04843.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.833
SFA77655.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.808
SFB04816.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.781
SFA77609.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.753
SFA73496.1
Sorbitol ABC transporter ATP-binding protein.
  
  0.750
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.