STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA71520.1Nitrate/nitrite transport system ATP-binding protein. (571 aa)    
Predicted Functional Partners:
SFA71507.1
Nitrate/nitrite transport system permease protein.
 
 
 0.982
SFA71580.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.964
SFA71493.1
Nitrate/nitrite transport system substrate-binding protein.
 
  0.961
SFA71484.1
NitT/TauT family transport system ATP-binding protein.
 
  0.956
SFA71545.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
  0.879
SFA71592.1
Anthranilate phosphoribosyltransferase.
 
     0.868
SFA71565.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 
     0.831
SFA71530.1
GAF domain-containing protein.
 
     0.829
SFA71467.1
Response regulator receiver and ANTAR domain protein.
 
     0.744
SFB11410.1
Putative hydroxymethylpyrimidine transport system substrate-binding protein.
  
 
  0.670
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
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