STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA71652.1Polysaccharide export outer membrane protein. (380 aa)    
Predicted Functional Partners:
SFA78306.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.996
SFA71632.1
Capsular polysaccharide export protein.
 
  
 0.993
SFA91311.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.974
SFA71885.1
Capsular polysaccharide transport system permease protein.
 
  
 0.955
SFB18448.1
Capsular polysaccharide transport system permease protein.
 
  
 0.955
SFB18457.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.942
SFB11809.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.936
SFA71663.1
Capsular polysaccharide export protein.
 
   
 0.925
SFA71869.1
Capsular polysaccharide transport system permease protein.
 
  
 0.897
SFA71894.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.892
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.