STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA73521.1Mannitol 2-dehydrogenase. (491 aa)    
Predicted Functional Partners:
SFA73484.1
Sorbitol ABC transporter membrane protein.
 
  
 0.938
uxaC
Glucuronate isomerase.
 
 
 0.921
SFA73471.1
Sorbitol ABC transporter membrane protein.
 
    0.915
SFB01036.1
Altronate hydrolase.
 
 0.892
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.890
SFA73462.1
Sorbitol-binding protein /mannitol-binding protein.
 
     0.872
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
    
 0.865
SFA87181.1
Fructokinase.
 
  
 0.844
SFA73496.1
Sorbitol ABC transporter ATP-binding protein.
 
    0.836
SFA73511.1
Hypothetical protein.
       0.768
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
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