STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA75658.1Spermidine/putrescine transport system permease protein. (255 aa)    
Predicted Functional Partners:
SFA75671.1
Spermidine/putrescine transport system permease protein.
 
  0.986
SFB06429.1
Putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  0.974
SFA75687.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
  0.971
SFA75648.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.964
SFB06456.1
Putrescine transport system permease protein.
 
  0.937
SFA73993.1
Putative spermidine/putrescine transport system permease protein.
 
  0.923
SFB10479.1
Spermidine/putrescine transport system permease protein.
 
  0.912
SFB17142.1
Putative spermidine/putrescine transport system permease protein.
 
  0.908
SFA75635.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.897
SFA96152.1
Putative spermidine/putrescine transport system permease protein.
 
  0.886
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.