STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA78383.1Hypothetical protein. (302 aa)    
Predicted Functional Partners:
SFA78404.1
Vesicle-fusing ATPase.
       0.794
SFA78371.1
Hypothetical protein.
       0.773
SFA78393.1
Protein of unknown function.
       0.773
SFA78420.1
Hypothetical protein.
       0.773
SFA78429.1
Hypothetical protein.
       0.773
SFA78436.1
Hypothetical protein.
       0.757
SFA78449.1
Hypothetical protein.
       0.726
SFA78457.1
Hypothetical protein.
       0.726
SFA78469.1
Hypothetical protein.
       0.701
SFA78479.1
Hypothetical protein.
       0.701
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.