STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA89162.1Monosaccharide ABC transporter ATP-binding protein, CUT2 family. (255 aa)    
Predicted Functional Partners:
SFA89143.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
SFA89115.1
Xylose-binding protein.
 
 0.964
SFA89092.1
Repeat domain-containing protein.
 
     0.844
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.842
xylB-2
Xylulokinase.
 
    0.805
SFA89103.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
     0.783
SFA91614.1
Erythritol ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.775
SFA75418.1
Mannose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.725
SFB07046.1
Rhamnose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.670
SFB15997.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.657
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.