STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA99701.1Dihydrolipoamide dehydrogenase. (585 aa)    
Predicted Functional Partners:
SFA99723.1
Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 
 0.999
SFA99715.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
0.993
SFA84603.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 
 0.989
SFA84615.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.989
SFB13629.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.988
SFA97050.1
Hypothetical protein.
  
 0.987
SFB13619.1
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
0.983
SFA73760.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
  
 0.981
SFA90479.1
Thiol-disulfide isomerase or thioredoxin.
  
 0.981
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.980
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.