STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB11865.1Glycosyl transferase family 2. (336 aa)    
Predicted Functional Partners:
SFB11872.1
Core-2/I-Branching enzyme.
 
   
 0.972
SFB11880.1
Hypothetical protein.
 
     0.957
SFB11809.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.857
SFB08431.1
Sulfotransferase family protein.
 
 
 0.826
SFB11856.1
Glycosyl transferases group 1.
 
 
  0.820
SFB18457.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.798
SFA74548.1
Hypothetical protein.
  
 
   0.788
SFB18448.1
Capsular polysaccharide transport system permease protein.
 
    0.780
SFA97598.1
Hypothetical protein.
 
     0.775
SFB08378.1
Hint domain-containing protein.
  
    0.773
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.