STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB13427.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (351 aa)    
Predicted Functional Partners:
SFB13412.1
Iron complex transport system ATP-binding protein.
 0.995
SFA73134.1
Iron complex transport system ATP-binding protein.
 0.980
SFA71147.1
Iron complex transport system ATP-binding protein.
 0.968
SFB13436.1
Iron complex transport system substrate-binding protein.
 
 
 0.897
SFA91387.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
0.865
SFA71158.1
Iron complex transport system substrate-binding protein.
 
 0.863
SFA73111.1
Iron complex transport system substrate-binding protein.
 
 0.862
SFA71124.1
Iron complex transport system substrate-binding protein.
 
 0.837
SFB13420.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    
0.830
SFA91415.1
Iron complex transport system ATP-binding protein.
 
    0.763
Your Current Organism:
Poseidonocella pacifica
NCBI taxonomy Id: 871651
Other names: DSM 29316, JCM 17310, KCTC 23693, KMM 9010, NRIC 0794, P. pacifica, Poseidonocella pacifica Romanenko et al. 2012, alpha proteobacterium KMM 9010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.