STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (244 aa)    
Predicted Functional Partners:
SFR00665.1
Flagellar biosynthetic protein FliQ.
 
 
 0.999
SFR00706.1
Flagellar biosynthetic protein FlhB.
 
 
 0.999
SFR00711.1
Flagellar biosynthetic protein FliR.
 
 
 0.999
SFR00748.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.999
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.998
SFR00730.1
Chemotaxis protein MotA.
 
  
 0.995
SFR00652.1
Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.994
SFR00658.1
Flagellar hook-basal body complex protein FliE.
  
 
 0.994
SFR00734.1
Flagellar motility protein MotE, a chaperone for MotC folding.
  
    0.994
SFR00776.1
Flagellar hook-associated protein 1 FlgK.
 
  
 0.992
Your Current Organism:
Poseidonocella sedimentorum
NCBI taxonomy Id: 871652
Other names: JCM 17311, KCTC 23692, KMM 9023, NRIC 0796, P. sedimentorum, Poseidonocella sedimentorum Romanenko et al. 2012, alpha proteobacterium KMM 9023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.