Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA67621.1 | AGA67622.1 | Desdi_0048 | Desdi_0049 | Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. | Cyanophycinase; PFAM: Peptidase family S51; Belongs to the peptidase S51 family. | 0.556 |
AGA67621.1 | AGA67623.1 | Desdi_0048 | Desdi_0050 | Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. | Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Belongs to the MurCDEF family. | 0.554 |
AGA67621.1 | AGA69278.1 | Desdi_0048 | Desdi_1828 | Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. | PFAM: N-acetylmuramoyl-L-alanine amidase; Putative cell wall binding repeat 2; Bacterial SH3 domain; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD. | 0.488 |
AGA67621.1 | AGA70466.1 | Desdi_0048 | Desdi_3061 | Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain. | 0.530 |
AGA67622.1 | AGA67621.1 | Desdi_0049 | Desdi_0048 | Cyanophycinase; PFAM: Peptidase family S51; Belongs to the peptidase S51 family. | Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. | 0.556 |
AGA67622.1 | AGA67623.1 | Desdi_0049 | Desdi_0050 | Cyanophycinase; PFAM: Peptidase family S51; Belongs to the peptidase S51 family. | Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Belongs to the MurCDEF family. | 0.976 |
AGA67623.1 | AGA67621.1 | Desdi_0050 | Desdi_0048 | Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Belongs to the MurCDEF family. | Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. | 0.554 |
AGA67623.1 | AGA67622.1 | Desdi_0050 | Desdi_0049 | Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Belongs to the MurCDEF family. | Cyanophycinase; PFAM: Peptidase family S51; Belongs to the peptidase S51 family. | 0.976 |
AGA67623.1 | AGA69278.1 | Desdi_0050 | Desdi_1828 | Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Belongs to the MurCDEF family. | PFAM: N-acetylmuramoyl-L-alanine amidase; Putative cell wall binding repeat 2; Bacterial SH3 domain; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD. | 0.462 |
AGA67623.1 | AGA70466.1 | Desdi_0050 | Desdi_3061 | Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Belongs to the MurCDEF family. | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain. | 0.659 |
AGA69278.1 | AGA67621.1 | Desdi_1828 | Desdi_0048 | PFAM: N-acetylmuramoyl-L-alanine amidase; Putative cell wall binding repeat 2; Bacterial SH3 domain; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD. | Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. | 0.488 |
AGA69278.1 | AGA67623.1 | Desdi_1828 | Desdi_0050 | PFAM: N-acetylmuramoyl-L-alanine amidase; Putative cell wall binding repeat 2; Bacterial SH3 domain; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD. | Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Belongs to the MurCDEF family. | 0.462 |
AGA70466.1 | AGA67621.1 | Desdi_3061 | Desdi_0048 | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain. | Hypothetical protein; PFAM: L,D-transpeptidase catalytic domain. | 0.530 |
AGA70466.1 | AGA67623.1 | Desdi_3061 | Desdi_0050 | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain. | Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Belongs to the MurCDEF family. | 0.659 |