STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGA67670.1Putative peptidoglycan-binding domain-containing protein; PFAM: Putative peptidoglycan binding domain; LysM domain. (178 aa)    
Predicted Functional Partners:
AGA68884.1
LysM domain-containing protein; PFAM: LysM domain.
 
  
 0.803
AGA70537.1
PFAM: Cell Wall Hydrolase; LysM domain.
 
   
 0.669
AGA69278.1
PFAM: N-acetylmuramoyl-L-alanine amidase; Putative cell wall binding repeat 2; Bacterial SH3 domain; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD.
  
  
 0.628
AGA67623.1
Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Belongs to the MurCDEF family.
 
  
 0.621
AGA70145.1
PFAM: Protein kinase domain; PASTA domain.
     
 0.612
AGA67671.1
Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.526
AGA67669.1
Hypothetical protein.
       0.486
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.481
AGA69173.1
Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family; G5 domain.
  
  
 0.472
AGA68146.1
Uncharacterized protein with SCP/PR1 domains; PFAM: Cysteine-rich secretory protein family.
 
    0.455
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.