STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA67677.1PFAM: Glycosyl transferase family 2. (424 aa)    
Predicted Functional Partners:
AGA69501.1
Flp pilus assembly protein TadD; PFAM: Tetratricopeptide repeat.
  
 
 0.801
AGA68977.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
  
 0.609
AGA69528.1
Hypothetical protein.
  
 
 0.608
AGA69352.1
Exopolysaccharide biosynthesis protein; PFAM: Predicted periplasmic protein (DUF2233).
  
     0.566
AGA70422.1
Exopolysaccharide biosynthesis protein; PFAM: Predicted periplasmic protein (DUF2233).
  
     0.566
AGA67842.1
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; PFAM: HAMP domain; HD domain; Cache domain; GGDEF domain; PAS fold.
  
  
 0.517
AGA67678.1
Agmatinase; PFAM: Arginase family; Belongs to the arginase family.
     
 0.490
AGA70806.1
Teichoic acid biosynthesis protein; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
   
 0.460
AGA67676.1
Hypothetical protein.
       0.445
AGA68800.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.422
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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