Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA67684.1PFAM: Hypothetical protein (DUF2513). (128 aa)    
Predicted Functional Partners:
AGA67683.1
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
       0.610
AGA67680.1
Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF499).
       0.583
AGA67681.1
Hypothetical protein.
       0.583
AGA67682.1
PFAM: Protein of unknown function (DUF1156).
       0.583
AGA67685.1
Putative ATP-dependent endonuclease of the OLD family; PFAM: Protein of unknown function (DUF2813).
       0.547
AGA67686.1
DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase.
       0.547
AGA68064.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.407
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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