STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AGA67715.1Histidine kinase with GAF domain; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain. (432 aa)    
Predicted Functional Partners:
AGA67716.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.
 
 
 
 0.930
AGA68505.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.788
AGA67713.1
Putative cobalamin binding protein; PFAM: B12 binding domain.
       0.773
AGA67714.1
PFAM: Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family.
     
 0.773
AGA70749.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 
 0.765
AGA70850.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain.
  
     0.764
AGA68874.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 
 0.758
AGA68646.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 
 0.752
AGA68526.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 
 0.744
AGA70044.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 
 0.733
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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