STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA67727.1Nitrous oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain. (636 aa)    
Predicted Functional Partners:
AGA69029.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
  
 
 0.996
AGA69030.1
PFAM: Cytochrome c.
 
 
 0.976
AGA67729.1
Parallel beta-helix repeat (two copies); PFAM: Periplasmic copper-binding protein (NosD).
 
  
 0.952
AGA67730.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
  
 0.940
AGA67728.1
Hypothetical protein.
 
  
 0.922
AGA67731.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
  
 0.922
AGA67726.1
PFAM: Cytochrome c.
  
  
 0.742
AGA67732.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.664
AGA67725.1
Cytochrome b subunit of the bc complex; PFAM: Cytochrome b(C-terminal)/b6/petD.
 
   
 0.614
AGA68531.1
Polyferredoxin; PFAM: 4Fe-4S binding domain.
 
  
 0.567
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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