STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA67761.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
AGA67763.1
Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain.
 
  
 0.967
AGA67759.1
Hypothetical protein.
 
     0.924
AGA67769.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
 
     0.804
AGA67842.1
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; PFAM: HAMP domain; HD domain; Cache domain; GGDEF domain; PAS fold.
  
 
 0.796
AGA70675.1
PAS/PAC sensor hybrid histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold.
  
 
 0.775
AGA67760.1
Replication restart DNA helicase PriA.
       0.737
AGA68525.1
Histidine kinase,HAMP domain-containing protein,histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365).
 
 
 0.727
AGA70601.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.717
AGA70547.1
PAS domain S-box; PFAM: Stage II sporulation protein E (SpoIIE); PAS fold.
  
 
 0.707
AGA67758.1
Metal-dependent hydrolase, beta-lactamase superfamily III.
   
 
 0.700
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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