STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA67788.1Fe-S oxidoreductase; PFAM: Cysteine-rich domain. (539 aa)    
Predicted Functional Partners:
AGA67787.1
PFAM: Nitrate reductase gamma subunit.
 
 
 0.956
AGA67791.1
Dissimilatory sulfite reductase alpha subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
  
 0.844
AGA67792.1
Dissimilatory sulfite reductase beta subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
  
 0.837
AGA67800.1
Sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC like protein.
 
 
 
 0.803
AGA67790.1
Hypothetical protein.
 
     0.773
AGA67795.1
PFAM: Nitrate reductase gamma subunit.
 
 
 0.766
AGA67797.1
PFAM: Doubled CXXCH motif (Paired_CXXCH_1).
 
  
 0.714
AGA70776.1
Sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC like protein.
 
 
 
 0.686
AGA69593.1
Hypothetical protein; PFAM: Cysteine-rich domain; Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein.
 
 
 0.679
AGA67789.1
NAD(FAD)-dependent dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rhodanese-like domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
  
  
 0.612
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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