Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA67808.1ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease. (404 aa)    
Predicted Functional Partners:
AGA67809.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.984
AGA67807.1
Multidrug resistance efflux pump.
 
 
 0.780
AGA67936.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.615
AGA68598.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.591
AGA70742.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.569
AGA67916.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.557
AGA67719.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.555
AGA68280.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.496
AGA67806.1
PFAM: YopX protein.
       0.410
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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