STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGA67890.1Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain. (208 aa)    
Predicted Functional Partners:
AGA67763.1
Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain.
  
  
 0.552
AGA67769.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
  
     0.546
AGA68607.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
  
    0.477
AGA68602.1
Hypothetical protein.
  
     0.443
AGA68606.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
  
    0.442
AGA68293.1
Putative ATP-dependent Lon-type protease.
  
     0.428
AGA68603.1
Hypothetical protein.
  
    0.421
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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