STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA67892.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (308 aa)    
Predicted Functional Partners:
AGA67891.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
 
  
 0.951
AGA67893.1
Hypothetical protein.
 
     0.945
AGA67843.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
 
  
 0.791
AGA67894.1
Hypothetical protein.
       0.780
AGA67845.1
Hypothetical protein.
 
     0.553
AGA69141.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
 
  
 0.545
AGA67895.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
     
 0.515
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.