STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA67895.1ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease. (390 aa)    
Predicted Functional Partners:
AGA67936.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.994
AGA67935.1
Hypothetical protein.
 
 
 0.993
AGA67809.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.982
AGA68598.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.980
AGA68280.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.977
AGA67916.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.975
AGA67719.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.973
AGA70742.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.958
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
   
 0.877
AGA70794.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 
      0.838
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.