STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA67950.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
AGA67951.1
CarD-like transcriptional regulator; PFAM: CarD-like/TRCF domain.
  
    0.661
AGA69087.1
Hypothetical protein.
  
     0.614
AGA69702.1
Hypothetical protein.
  
     0.607
AGA70425.1
PFAM: Membrane protein of unknown function.
  
     0.602
AGA67709.1
PFAM: YtxC-like family.
  
     0.556
AGA69229.1
PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.
  
    0.552
AGA67952.1
Integral membrane protein (PIN domain superfamily); PFAM: TRAM domain; PIN domain.
       0.549
AGA68559.1
Hypothetical protein.
  
     0.509
AGA69854.1
PFAM: Protein of unknown function (DUF322).
  
     0.506
AGA69905.1
PFAM: Protein of unknown function (DUF1292); Belongs to the UPF0473 family.
  
    0.500
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.