STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA68027.1Sugar diacid utilization regulator. (545 aa)    
Predicted Functional Partners:
AGA68031.1
PFAM: DMSO reductase anchor subunit (DmsC).
 
     0.773
AGA68111.1
Hypothetical protein.
  
     0.670
truA-2
Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.668
AGA68523.1
PFAM: DMSO reductase anchor subunit (DmsC).
 
     0.637
AGA68522.1
PFAM: DMSO reductase anchor subunit (DmsC).
  
     0.610
AGA68028.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.603
AGA67633.1
Hypothetical protein.
  
     0.599
AGA69871.1
Competence protein A.
  
     0.599
AGA70036.1
Hypothetical protein; Manually curated.
  
     0.598
AGA70518.1
PFAM: Tripartite tricarboxylate transporter TctB family.
  
     0.570
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.