STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA68084.1Putative periplasmic solute-binding protein; PFAM: YceG-like family. (155 aa)    
Predicted Functional Partners:
AGA68083.1
RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4.
       0.780
AGA70261.1
PFAM: Flagellar hook-length control protein FliK.
 
     0.704
AGA70036.1
Hypothetical protein; Manually curated.
 
     0.615
AGA67633.1
Hypothetical protein.
  
     0.611
AGA69871.1
Competence protein A.
  
     0.608
AGA68562.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2.
  
     0.606
AGA69439.1
PFAM: Domain of unknown function (DUF1836).
  
     0.605
AGA69555.1
Hypothetical protein.
  
     0.591
AGA68166.1
Hypothetical protein.
  
     0.587
AGA70350.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
  
     0.573
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.