STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA68236.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
AGA68285.1
PFAM: DMSO reductase anchor subunit (DmsC).
  
     0.662
AGA68490.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
     0.607
AGA69121.1
Large extracellular alpha-helical protein; PFAM: Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region.
  
     0.603
AGA68322.1
PFAM: Tripartite tricarboxylate transporter TctB family.
  
     0.586
AGA68196.1
Hypothetical protein.
  
     0.550
AGA68768.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
     0.550
AGA68281.1
YVTN family beta-propeller repeat protein.
  
     0.537
AGA70369.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
  
     0.534
AGA69958.1
PFAM: Doubled CXXCH motif (Paired_CXXCH_1).
  
     0.526
AGA68324.1
Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: 4Fe-4S binding domain.
  
     0.523
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.