Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA68281.1YVTN family beta-propeller repeat protein. (383 aa)    
Predicted Functional Partners:
AGA68279.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
     0.835
AGA68280.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
     0.813
AGA68285.1
PFAM: DMSO reductase anchor subunit (DmsC).
 
     0.797
AGA68283.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain.
 
   
 0.750
AGA68490.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
 
     0.693
AGA68282.1
Hypothetical protein.
       0.680
AGA68284.1
Fe-S-cluster-containing hydrogenase subunit.
       0.625
AGA69958.1
PFAM: Doubled CXXCH motif (Paired_CXXCH_1).
 
     0.622
AGA68768.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
 
     0.619
AGA68322.1
PFAM: Tripartite tricarboxylate transporter TctB family.
  
     0.614
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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