STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA68291.1Hypothetical protein. (1402 aa)    
Predicted Functional Partners:
AGA68292.1
Hypothetical protein.
 
     0.961
AGA68293.1
Putative ATP-dependent Lon-type protease.
 
     0.953
AGA68290.1
PAPS reductase/FAD synthetase family protein; PFAM: Phosphoadenosine phosphosulfate reductase family.
 
     0.952
AGA68294.1
Hypothetical protein.
       0.790
AGA68289.1
Hypothetical protein.
       0.779
AGA70369.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
  
     0.625
AGA68887.1
Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.600
AGA70563.1
Hypothetical protein.
  
     0.544
AGA68925.1
PFAM: Plasmid stabilisation system protein.
  
     0.520
AGA69556.1
PFAM: Predicted metal-binding protein (DUF2103).
  
     0.506
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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