STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA68298.1PFAM: Protein of unknown function (DUF3102). (271 aa)    
Predicted Functional Partners:
AGA69146.1
Hypothetical protein.
  
     0.728
AGA69710.1
Plasmid segregation actin-type ATPase ParM.
  
   
 0.710
AGA70616.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2.
  
     0.704
AGA70204.1
Hypothetical protein.
  
     0.680
AGA70626.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
  
    0.677
AGA70770.1
ABC-type sugar transport system, periplasmic component.
 
    0.658
AGA68703.1
PFAM: Protein of unknown function DUF88.
  
     0.657
AGA70424.1
PFAM: Stage II sporulation protein P (SpoIIP).
  
   
 0.631
AGA70293.1
PFAM: FlaG protein.
  
     0.624
AGA67644.1
PFAM: Spore cortex protein YabQ (Spore_YabQ).
  
     0.619
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.