STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA68299.1PFAM: Protein of unknown function (DUF2922). (79 aa)    
Predicted Functional Partners:
AGA68300.1
PFAM: Protein of unknown function (DUF1659).
 
     0.893
AGA69984.1
Hypothetical protein.
  
     0.684
AGA70532.1
PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
     0.669
AGA68058.1
PFAM: Protein of unknown function (DUF1659).
 
     0.586
AGA70467.1
PFAM: rod shape-determining protein MreD.
  
     0.584
AGA69860.1
PFAM: Stage III sporulation protein AF (Spore_III_AF).
  
     0.565
AGA69736.1
ClpP class periplasmic serine protease; PFAM: Serine dehydrogenase proteinase.
  
     0.562
AGA69359.1
DnaD-like protein; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
  
     0.539
AGA68707.1
Hypothetical protein.
  
     0.512
AGA70895.1
Hypothetical protein.
  
     0.481
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.