STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA68305.1PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit. (334 aa)    
Predicted Functional Partners:
AGA69370.1
PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.
 
 
 0.987
AGA69366.1
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit.
 
 
 0.969
AGA68306.1
4Fe-4S protein.
 
   
 0.936
AGA68304.1
Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
       0.723
AGA69368.1
Putative metal-binding protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
 
 
 
 0.652
AGA69723.1
Putative metal-binding protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
 
 
 
 0.650
AGA69413.1
Hypothetical protein.
  
     0.614
AGA68303.1
Arsenical-resistance protein; PFAM: Sodium Bile acid symporter family.
     
 0.585
AGA68302.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
       0.579
AGA70491.1
Hypothetical protein.
  
     0.577
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.