Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AGA68322.1PFAM: Tripartite tricarboxylate transporter TctB family. (150 aa)    
Predicted Functional Partners:
AGA70518.1
PFAM: Tripartite tricarboxylate transporter TctB family.
  
  
  0.962
AGA68320.1
Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: 4Fe-4S binding domain.
 
     0.942
AGA68324.1
Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: 4Fe-4S binding domain.
 
     0.939
AGA70108.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter TctB family.
     
  0.900
AGA68323.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter TctA family.
 
  
 0.892
AGA68319.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter family receptor.
 
  
 0.815
AGA68321.1
Hypothetical protein; Manually curated.
       0.781
AGA68490.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
     0.768
AGA68196.1
Hypothetical protein.
  
     0.764
AGA68768.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
     0.757
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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