Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA68399.1Formate-dependent nitrite reductase, membrane component; PFAM: Polysulphide reductase, NrfD. (285 aa)    
Predicted Functional Partners:
AGA68397.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.830
AGA68398.1
Fe-S-cluster-containing hydrogenase subunit.
 
    0.810
AGA68396.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.781
AGA68766.1
PFAM: Polysulphide reductase, NrfD.
  
   
 0.735
AGA68494.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.699
AGA69156.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.672
AGA68484.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.641
AGA68767.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.620
AGA68028.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.619
AGA70751.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.609
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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