Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AGA68426.1PFAM: Predicted membrane protein (DUF2207). (566 aa)    
Predicted Functional Partners:
AGA68425.1
Hypothetical protein; PFAM: LemA family.
 
     0.872
AGA68427.1
Hypothetical protein.
       0.719
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.630
AGA68429.1
Hypothetical protein.
  
     0.606
AGA69279.1
PFAM: YGGT family.
  
     0.538
AGA68428.1
Cell wall-binding protein; PFAM: Putative cell wall binding repeat 2; Putative Ig domain.
 
     0.533
AGA68424.1
Hypothetical protein.
       0.530
AGA70556.1
LysM domain-containing protein; PFAM: LysM domain.
  
     0.513
AGA69960.1
Glutaredoxin-like protein; PFAM: Glutaredoxin.
  
     0.500
AGA68236.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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