STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA68439.1PFAM: Protein of unknown function (DUF1538). (497 aa)    
Predicted Functional Partners:
AGA68440.1
PFAM: Nitrogen regulatory protein P-II.
 
     0.951
AGA68309.1
Nitrogen regulatory protein PII.
 
     0.792
AGA68438.1
PFAM: Helix-turn-helix.
  
    0.681
AGA68894.1
Putative Zn peptidase; PFAM: Domain of unknown function (DUF955).
  
  
 0.528
AGA70798.1
Putative amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain.
   
    0.504
AGA68441.1
PFAM: Protein of unknown function (DUF2500).
       0.475
AGA67821.1
Putative permease, DMT superfamily; PFAM: EamA-like transporter family.
  
     0.456
AGA67863.1
Hypothetical protein; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family.
  
    0.455
AGA68190.1
Sporulation/spore germination protein; PFAM: Sporulation and spore germination.
  
     0.450
AGA70873.1
Hypothetical protein; PFAM: F420-0:Gamma-glutamyl ligase.
  
     0.431
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.