STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AGA68453.1Carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane/CO dehydrogenase family. (637 aa)    
Predicted Functional Partners:
AGA69370.1
PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.
 
 
 0.998
AGA69366.1
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit.
 
 
 0.984
AGA69369.1
PFAM: Putative Fe-S cluster; CO dehydrogenase/acetyl-CoA synthase delta subunit.
 
 
 0.981
AGA69371.1
acetyl-CoA decarbonylase/synthase alpha subunit; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.
  
  
 
0.922
AGA68184.1
Carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane/CO dehydrogenase family.
  
  
 
0.916
AGA67792.1
Dissimilatory sulfite reductase beta subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
  
  
 0.914
AGA67791.1
Dissimilatory sulfite reductase alpha subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
  
  
 0.912
AGA68697.1
NAD-dependent formate dehydrogenase catalytic subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; Contains selenocysteine; manually curated.
    
 0.908
AGA68183.1
Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain.
    
 0.907
AGA69372.1
CO dehydrogenase maturation factor; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
   
 0.775
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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