Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA68467.1PFAM: Nitroreductase family. (175 aa)    
Predicted Functional Partners:
AGA68909.1
Reductive dehalogenase; PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: reductive dehalogenase; Tat (twin-arginine translocation) pathway signal sequence.
     
 0.630
AGA68466.1
PFAM: Purine catabolism regulatory protein-like family.
       0.581
AGA68420.1
Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase.
 
  
 0.559
AGA70167.1
ABC-type multidrug transport system, permease component.
  
  
 0.545
birA
birA, biotin-(acetyl-CoA-carboxylase) ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.540
AGA70870.1
Lactoylglutathione lyase-like lyase.
  
  
 0.538
AGA68465.1
Uncharacterized protein, possibly involved in glyoxylate utilization; PFAM: Cupin domain.
       0.456
AGA68572.1
Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
  
 0.447
tadA
Cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.424
AGA68213.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
     
 0.422
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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