STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA68478.1PAS domain S-box; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold. (768 aa)    
Predicted Functional Partners:
AGA70675.1
PAS/PAC sensor hybrid histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold.
  
 
 0.957
AGA68480.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.930
AGA68498.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.930
AGA70347.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.927
AGA69362.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.923
AGA68477.1
Phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein.
 
   
 0.901
AGA68383.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
 
 
 0.767
AGA70036.1
Hypothetical protein; Manually curated.
 
 
 0.756
AGA67842.1
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; PFAM: HAMP domain; HD domain; Cache domain; GGDEF domain; PAS fold.
  
 
 0.745
AGA70547.1
PAS domain S-box; PFAM: Stage II sporulation protein E (SpoIIE); PAS fold.
 
 
 0.745
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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