Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA68499.1PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (489 aa)    
Predicted Functional Partners:
AGA68498.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.967
AGA68500.1
Phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein.
 
     0.886
AGA68480.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.861
AGA70347.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.861
AGA69362.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.855
AGA68502.1
Hypothetical protein.
 
    0.652
AGA68497.1
Formate-dependent nitrite reductase, membrane component; PFAM: Polysulphide reductase, NrfD.
 
     0.628
AGA68383.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
 
 
 0.566
AGA68501.1
Putative stress-responsive transcriptional regulator; PFAM: PspC domain.
  
  
 0.554
AGA70145.1
PFAM: Protein kinase domain; PASTA domain.
 
  
 0.498
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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