STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobQAdenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (523 aa)    
Predicted Functional Partners:
AGA68543.1
PFAM: Precorrin-8X methylmutase.
  
 0.999
AGA68540.1
Precorrin-3 methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases.
  
 0.998
AGA68541.1
Cobalt-precorrin 6A reductase; PFAM: Precorrin-6x reductase CbiJ/CobK.
 
  
 0.998
AGA68537.1
Precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; cobalt-factor II C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.997
AGA68538.1
Cobalt-precorrin 4 C11-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Belongs to the precorrin methyltransferase family.
 
  
 0.997
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
 
 0.997
AGA69526.1
PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase.
  
 0.995
AGA69716.1
PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase.
  
 0.992
AGA68549.1
L-threonine O-3-phosphate decarboxylase; PFAM: Aminotransferase class I and II.
  
 0.991
AGA68547.1
PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP.
 
  
 0.990
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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