STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA68586.1Putative glutamine amidotransferase; PFAM: Peptidase C26. (247 aa)    
Predicted Functional Partners:
AGA69610.1
Dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19).
     0.913
AGA68584.1
Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain; PFAM: Ribbon-helix-helix protein, copG family.
       0.645
AGA68585.1
Growth inhibitor; Toxic component of a type II toxin-antitoxin (TA) system.
       0.643
AGA68331.1
PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain.
  
  
 0.591
AGA68358.1
Putative transcriptional regulator; PFAM: Cupin domain.
 
  
 0.526
AGA68357.1
Putative transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix.
 
  
 0.505
AGA68931.1
Putative transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix.
  
  
 0.423
AGA70428.1
PFAM: Competence protein; Metallo-beta-lactamase superfamily.
     
 0.410
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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