STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AGA68722.1Type I restriction system adenine methylase HsdM; PFAM: N-6 DNA Methylase; HsdM N-terminal domain. (584 aa)    
Predicted Functional Partners:
AGA68720.1
PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.988
AGA68719.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.973
AGA68950.1
PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.955
AGA68721.1
Hypothetical protein.
 
   
 0.944
AGA68948.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.896
AGA68947.1
PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.848
AGA67858.1
PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.748
AGA67855.1
PFAM: N-6 DNA Methylase; Type I restriction modification DNA specificity domain.
  
 
 0.682
AGA67859.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.643
AGA68718.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
       0.546
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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