STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGA68768.1Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. (290 aa)    
Predicted Functional Partners:
AGA68767.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.881
AGA68763.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
 
     0.860
AGA68766.1
PFAM: Polysulphide reductase, NrfD.
 
   
 0.811
AGA68764.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.776
AGA68322.1
PFAM: Tripartite tricarboxylate transporter TctB family.
  
     0.757
AGA69958.1
PFAM: Doubled CXXCH motif (Paired_CXXCH_1).
 
     0.755
AGA68497.1
Formate-dependent nitrite reductase, membrane component; PFAM: Polysulphide reductase, NrfD.
  
     0.743
AGA68196.1
Hypothetical protein.
  
     0.739
AGA68111.1
Hypothetical protein.
  
     0.736
AGA68758.1
Major membrane immunogen, membrane-anchored lipoprotein.
  
     0.717
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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