STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA68905.1Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain. (520 aa)    
Predicted Functional Partners:
AGA68898.1
Site-specific recombinase, DNA invertase Pin; PFAM: Resolvase, N terminal domain.
 
     0.762
AGA68904.1
SEC-C motif-containing protein; PFAM: SEC-C motif.
       0.668
AGA69209.1
PFAM: C-5 cytosine-specific DNA methylase; manually curated; non-canonical start codon; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
    0.666
AGA68831.1
Hypothetical protein.
  
     0.657
AGA68851.1
PFAM: C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
    0.575
AGA68906.1
KilA-N domain-containing protein; PFAM: KilA-N domain.
       0.541
AGA69184.1
Hypothetical protein.
  
     0.540
AGA68792.1
Hypothetical protein.
  
     0.533
AGA68721.1
Hypothetical protein.
 
     0.516
AGA68822.1
Hypothetical protein.
  
     0.512
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.