STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA69152.1Sugar diacid utilization regulator. (410 aa)    
Predicted Functional Partners:
AGA69150.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.828
AGA69151.1
Fe-S-cluster-containing hydrogenase subunit.
       0.782
AGA69156.1
Putative component of anaerobic dehydrogenase; PFAM: Nitrate reductase delta subunit.
 
     0.522
AGA69153.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.509
AGA68285.1
PFAM: DMSO reductase anchor subunit (DmsC).
  
     0.502
AGA68322.1
PFAM: Tripartite tricarboxylate transporter TctB family.
  
     0.466
AGA68497.1
Formate-dependent nitrite reductase, membrane component; PFAM: Polysulphide reductase, NrfD.
  
     0.464
AGA69154.1
Fe-S-cluster-containing hydrogenase subunit.
       0.432
AGA69155.1
PFAM: Polysulphide reductase, NrfD.
       0.432
tatA-3
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
       0.424
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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