STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69171.1Hypothetical protein. (187 aa)    
Predicted Functional Partners:
AGA69502.1
Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
  
    0.524
AGA69520.1
Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
  
    0.524
AGA70232.1
Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
  
    0.524
AGA69172.1
PFAM: Amino acid permease.
       0.520
AGA69170.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1287).
       0.472
AGA68290.1
PAPS reductase/FAD synthetase family protein; PFAM: Phosphoadenosine phosphosulfate reductase family.
 
 
   0.455
AGA69485.1
PFAM: Domain of Unknown Function (DUF1540).
  
     0.439
AGA70036.1
Hypothetical protein; Manually curated.
  
    0.429
AGA68027.1
Sugar diacid utilization regulator.
  
     0.427
AGA68589.1
PFAM: DoxX.
  
    0.415
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.