Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA69224.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
AGA69223.1
Type IV secretory pathway, VirD4 component; PFAM: TraG/TraD family.
 
     0.947
AGA69222.1
Hypothetical protein.
 
     0.881
AGA69220.1
Hypothetical protein.
 
     0.846
AGA68866.1
Type IV secretory pathway, VirD4 component; PFAM: TraG/TraD family.
 
     0.780
AGA68855.1
Protein of unknown function DUF87.
  
     0.770
AGA69213.1
Protein of unknown function DUF87.
  
     0.769
AGA68846.1
Hypothetical protein.
  
     0.767
AGA68849.1
Hypothetical protein.
  
     0.767
AGA69207.1
Hypothetical protein.
  
     0.766
AGA69205.1
Hypothetical protein.
  
     0.765
Your Current Organism:
Desulfitobacterium dichloroeliminans
NCBI taxonomy Id: 871963
Other names: D. dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans DCA1, Desulfitobacterium dichloroeliminans LMG P-21439, Desulfitobacterium dichloroeliminans LMG P21439, Desulfitobacterium dichloroeliminans str. LMG P-21439, Desulfitobacterium dichloroeliminans strain LMG P-21439
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